Konstantin Kalinin
Konstantin Kalinin
Head of Content
May 15, 2025

I don’t know about you, but I switch apps on my phone once a month to check out the hype and look for innovations. Unfortunately, this approach won’t work for EHR/EMR software.

You can’t switch an EHR on a whim without losing productivity. Yet, providers still have to jump the rails occasionally to try and find a perfect tool for managing health records. They might even consider building an EHR system of their own.

When creating an EHR or EMR system, healthcare providers need scalable, secure, and flexible solutions. This is why the demand for EHR application development has skyrocketed. Building such systems from scratch or adopting existing frameworks enables medical institutions to customize workflows and optimize patient care.

So how do you make an electronic health record system that’s scalable, secure, and hype-resistant?

That’s precisely what I invite you to discuss today. We’ll go through the entire process, step by step, and I’ll equip you with the best practices and actionable advice.

Top Takeaways:

  • Before attempting to build an EHR system from scratch, see how you can leverage existing software by integrating EHR data with lightweight doctor- or patient-focused front end applications.
  • When working on a full-fledged EHR/EMR platform, you’ll need to create multiple applications optimized for different user roles and potentially supporting various platforms across web and mobile.
  • Rapid prototyping is an essential part of EHR development and helps us align an EMR system’s features with specific healthcare providers’ goals and practices.

Table of Contents:
1. What’s the Difference Between EMR and EHR
2. Why You Need an EHR or EMR System: 3 Main Reasons
3. Ready-Made vs. Custom EHR Solutions
4. EHR Software Development Process

5. Tech Stack for Building EMR/EHR Software
6. EHR/EMR System Development Cost
7. Topflight Apps’ Experience in EHR Software Development

What’s the Difference Between EMR and EHR

Some people say EMR and EHR are different. If you want my opinion, it’s the same thing. That happens to align with how leading EHR/EMR providers like Epic and Cerner define their software, too: the terms are sprinkled across their sites seemingly at random.

how to develop an ehr/emr systemIf we’re completely honest, though, we’d have to admit that EHR is a more general term, simply because it’s used more often. In practice, we have to stick with the EMR term because some people still google that instead of EHR when searching for healthcare app development support. 

However, I am 99% positive you don’t even care about this specious difference (if you do, consider booking a call). So, please excuse me for this little filler intro. I suggest we leave this argument for the ONC masterminds (The Office of the National Coordinator for Health Information Technology) and instead jump to the more juicy and practical stuff.

Why You Need an EHR or EMR System: 3 Main Reasons

I’m sure you’ll admit there’s no going back to the good old days of handwritten patient records. As much as doctors complain about modern EHR and EMR, calling them “glorified cash registers” turning providers into data-entry clerks, we can’t deny their obvious advantages.

So why develop an EHR system? In the perfect world, we design EHR software to get the following upsides.

Increased efficiency

Automation that comes with EHR helps streamline internal workflows. When done right, an EMR system can make everyone’s life at a healthcare facility easier:

  • faster decision-making
  • less space to store paper medical records
  • no unnecessary overtime labor
  • improved employee’s morale

convoluted EHR experienceDoctors have to suffer through this (in our day and age!)

Better patient outcomes

As you’d imagine, happy healthcare providers and caregivers mean better patient outcomes. Empowered with the right tools, doctors can spend less time dealing with software and more time with patients, providing improved care as a result. That, in turn, leads to:

  • strong loyalty among patients
  • more personalized care
  • lower readmission rates
  • stronger patient-physician relationships

Optimized costs

And the major “side-effect” of setting up an EMR system is, of course, every dollar driving more value out of the healthcare system. When EHR software takes over routine tasks and helps clinicians and other medical personnel every step of their way as a decision support tool, you no longer need to throw billions of dollars at the thing to make it run efficiently 24/7.

Ready-made vs. Custom EHR Solutions

When we talk about software, there are really only two options of handling it — either you adopt software or the software adopts you.

The seemingly easier route is to go and implement one of the well-known EHR systems, such as Epic, Cerner, Allscripts, you name it – instead of custom EMR/EHR software development. Such an approach has its advantages and drawbacks:

Implementing an out-of-the-box EHR system

ProsCons
  • relatively fast setup
  • off-set initial cost due to the subscription model
  • ready ecosystem
  • might not work with your stuff
  • long-term cost will be higher than with a custom-built EHR
  • total dependence on a vendor
  • walled garden
  • extensive personnel training required

As you can see, this is the scenario where software adopts you. You need to learn how to use it, find a way around its quirkiness and integrate it with everything else you’re using, train personnel, etc.

Alternatively, you can build your own EHR platform, and it doesn’t have to be that scary hairy thing from the 90s. If we like working with Gmail or Facebook, why can’t we create EHR software that works and feels as intuitive?

Related: How to integrate your health app with EPIC EHR/EMR and Allscripts EHR integration.

The flashforward is we can, but we’ll talk about that later. For now, let’s see what the implications are with custom EHR software development:

Developing a custom EHR system

ProsCons
  • integrates with everything you need
  • works the way you need
  • further improvements at your will
  • minimal personnel training
  • no hidden costs
  • additional revenue via the SaaS model
  • takes longer to implement than a ready-made EHR system
  • still need a dedicated team to maintain and support
  • will need to take care of licensing to offer your EMR via the SaaS model

Opting for EHR custom software development allows healthcare providers to tailor their system to meet specific needs, from patient record management to clinical decision support. This customized approach is a major advantage over out-of-the-box solutions, which often lack the flexibility required by different medical practices.

For a more detailed breakdown of the EHR cost, you can visit our comprehensive guide on EHR implementation.

EHR Software Development Process: Step by Step

As you can see, it’s not exactly rocket science — EMR software development pays off in huge dividends in the long run. I suggest we jump right into action and start discussing how to build an EHR system. After all, isn’t this why you’re here?

how to build EHR system question banner 1

Once you’ve skimmed through the steps below, the question “How to create an electronic medical record system?” will no longer sound daunting at all.

To guide you through the process step by step, here’s an overview table of the key phases involved in how to build an EHR system, breaking down each stage for clarity and focus.

StepDescription
Step 1: Get Data Migration PlanPrepare your EHR system to import legacy data accurately and communicate with external systems via standards like FHIR and HL7.
Step 2: Identify Core ModulesDefine essential modules like patient records, scheduling, billing, and eRx. Prioritize MVP features to avoid overengineering.
Step 3: Get Key RequirementsGather and validate user-specific requirements to guide development and ensure alignment with real clinical and administrative workflows.
Step 4: Ensure ComplianceAddress HIPAA, SOC 2, ONC certification, and other regulations early to avoid costly rework later.
Step 5: Design System ArchitecturePlan the data flow, backend services, and security layers. Align UI and core feature architecture with agile best practices.
Step 6: Choose Technology StackSelect backend, frontend, and database technologies that align with your team’s expertise, scalability goals, and compliance needs.
Step 7: Create Custom UI/UXBuild user-centered designs based on actual workflows. Prototype, test, and refine with real clinical users.
Step 8: Integrate APIs, etc.Add connectivity to labs, pharmacies, telehealth, and wearable data using secure APIs and an event-driven architecture.
Step 9: Implement Data SecurityApply HIPAA-compliant encryption, access control, and automated backup strategies to protect patient data.
Step 10: Prepare for LaunchFinalize documentation, perform readiness checks, and coordinate your team for a smooth go-live experience.
Step 11: Testing and ValidationRun functional, load, and security tests. Simulate edge cases and validate performance in real-world clinical environments.
Step 12: Phased Roll-Out/Train StaffDeploy the system gradually and tailor training by user role to ensure adoption and minimize disruption.
Step 13: Support and MaintenanceMonitor feedback, ship regular updates, and maintain compliance to keep the EHR system aligned with evolving needs.

Now, let’s dive in.

Step 1: Establish a Data Migration and Interoperability Plan

A robust data migration and interoperability plan is one of the first things that should be tackled in your EHR journey—not tacked on later. This step is not just about “importing legacy data.” It’s about ensuring your new EHR can both absorb data from previous systems and communicate with other platforms in the healthcare ecosystem.

That includes planning for:

  • Legacy data formatting, cleanup, and validation
  • Mapping historical records to new data models
  • Choosing interoperability protocols (e.g., FHIR, HL7)
  • Establishing connections to labs, imaging systems, pharmacies, and even health information exchanges (HIEs)

Don’t forget: even if you build a great EHR, it won’t be adopted if it can’t talk to the systems your partners and clinicians already rely on.

Data migration

Migrating existing patient records into a new system is a foundational step in building EHR software. The process must preserve every detail to maintain continuity of care and regulatory compliance (e.g., HIPAA, audit trails, data retention policies).

You probably already keep patient data in a system of sorts. Therefore, migrating that data into the EHR without losing any information is vital for ERM software development. Other data practices include caching.

For example, it’s recommended to cache data on mobile to not lose data and sync it correctly. Imagine a doctor entering patient information while being offline; then, when the device comes online again, the software needs not only to upload the missing data but also sync back from the EHR anything other team members might have entered in the interim – all of that without overwriting or losing any info.

APIs

API integration is essential in developing an interoperable EHR system, allowing seamless data exchange with labs, pharmacies, and third-party services. This ensures your platform supports clinical workflows and real-time access to patient data.

APIs ensure EMR interoperability: being able to send and receive data (e.g., lab results) in prerequisite formats, process it,  and then output for customers on the respective platform. That’s where FHIR by HL7 and other data standards and coding (e.g., CPT, DICOM, CCD) come into play.

With Specode’s AI-powered capabilities, custom healthcare software development for EHR/EMR systems becomes incredibly fast and flexible, allowing for seamless integration and unmatched performance.

APIs play a critical role in enabling EHR custom software development by allowing systems to pull patient visit data, manage medication lists, and synchronize treatment plans across multiple platforms seamlessly.

Step 2: Identify Core Modules

Before diving into design or development of an EHR system, you need to map out the core modules your EHR system will include. Think of this step as drawing the first real outline of your product — identifying what needs to exist from day one versus what can wait. These modules aren’t just features; they’re the backbone of your clinical and administrative workflows.

Some of the most common modules to consider:

  • Patient records and charting
  • Appointment scheduling
  • Lab and imaging integration
  • Billing and insurance handling
  • E-prescriptions
  • Communication tools (internal chat, patient messaging)
  • Reporting and analytics
  • Role-based access control

You won’t need them all upfront — which is why identifying the initial core is so critical. This connects directly to your MVP strategy.

Realize you’ll be building more than a single app

Successful EHR system development often involves building a suite of apps—patient portals, clinician dashboards, admin panels—not just one interface. Each must support unique workflows and secure data access.

If you think of it, that’s really hard to miss. Yet, most companies talking about EHR development skip the part where they tell you you’ll be building multiple apps.

That’s something you can’t escape realizing during the strategy workshop. Because going through your target audience’s needs, you can’t help but notice that a lot of people will be using your EHR system in a lot of different ways.

You can think of nurses and doctors filling in patient details or looking up their vitals and other info on the platform. Then there will be front-office workers, administrators, and management using the system, right? They will use it on different devices.

Therefore, the question becomes, “How do we fit all of that into a single EHR platform?” How do we create EMR software that works equally well for all users on smartphones, desktop machines, tablets, etc.?

EMR EHR cross platform conceptThe simple answer is we build multiple applications for different use cases. In reality, your EHR system is going to be like a layer cake. If you zoom out a little, you’ll see:

  • multiple front-ends (that’s how developers call apps we, users, interact with)
  • APIs layer
  • security mechanisms
  • back end with databases

Related: Complete Guide to Building a Healthcare App

That’s a very simplistic illustration of what a typical EHR platform would look like. However, the bottom line is that you and your team will be working on several separate applications. Let’s say:

  • a tablet-optimized application for doctors
  • a smartphone and a web-based (works best in desktop browsers) apps for doctors
  • a web application for administration and management

As you already know, when you build your own EHR software, nothing stops you from building independent applications (that still work in tandem, syncing all clinical data) for different user roles based on their unique needs.

Minimal viable product is your everything

When creating EHR software, a tightly scoped MVP helps you stay lean while validating the most critical features—like patient charts, scheduling, or lab results—in real healthcare environments.

Even though a clinic, private practice, or hospital may benefit from implementing all possible applications that make up an EHR system, you need to focus on your ROI goals.

EHR development concept

What parts of the system are likely to produce an immediate payback? Which parts of your healthcare system will benefit most from EHR automation? Start with them. There’s no need to start EHR/EMR software in its entirety, with all possible bells and whistles.

Related: MVP App Development: Everything You Need to Know 

In my opinion, the ideal scenario would be, to begin with a single app for doctors and nurses (which will adapt its interface based on a user role) and another one for admins. Even then, you should trim features to the bare minimum that will drive measurable value, for example:

  • faster test results from labs
  • built-in e-prescribing
  • on-the-go patient’s health medical history

Once the metrics are confirmed, you will continue improving on your minimal viable product (MVP), drawing funds from lowered expenses or new revenue streams.

This MVP thing and your decision about which parts of the EHR system to start with naturally belong to the strategy step.

how to build EHR system question banner 2

Step 3: Get Key Functional Requirements

Nailing down functional requirements is critical before you develop EHR software. You’ll define how the system supports patient care, clinical documentation, compliance reporting, and more—long before any coding begins. You need a sharp, reality-checked understanding of what your EHR must do — for whom, and why. This step sets the foundation for every design and engineering decision downstream.

Think of it in three parts:

  • Assessment: Start by exploring your current pain points. What workflows are inefficient? Where do you lose time or data fidelity? What are clinicians, admins, and patients currently complaining about?
  • Scope Definition: Once the gaps are clear, you’ll need to define which features are mission-critical versus nice-to-have. This also includes setting boundaries — what won’t your EHR do in v1?
  • Business Case: Tie your functional needs back to measurable outcomes. Are you reducing readmission rates? Improving billing accuracy? Shortening appointment cycles? These anchor your MVP and long-term roadmap in ROI logic, not wishlist thinking.

This is not just a list-making exercise. It’s about aligning your product vision with clinical reality and financial viability.

No surprise here. Any project, be it EHR system development or clinic construction, requires thorough research and planning. You’ll have to answer questions like:

  • Who will be the primary users of this new EMR system?
  • What is the end goal for implementing an EHR?
  • Do I have some target dates for delivering the system?
  • How will I measure the success of the project?

These and myriad other questions will need answers to shape the project scope accordingly. Ultimately, the deliverables of the strategy session will come down to:

  • lean canvas (just a clever word for business plan/model)
  • high-level, prioritized feature list
  • approximate diagram of the EHR’s architecture

When planning EHR system design, it’s crucial to align the system with the workflows of your healthcare organization. Consider the various roles that will interact with the system—whether you’re looking to create an EMR system or build a comprehensive EHR platform. Each role, from administrative staff to doctors, will require different functionalities.

Most development agencies love when a customer comes with a ready plan and a clear vision, so they can start executing without delay. Others, like Topflight, prefer to help you form your strategy, sometimes starting with nothing but a napkin sketch.

For example, we’d take you through a well-defined discovery process and help you align your EHR vision with your end goals tied to specific ROI metrics.

EHR system doctor abstractionAt the end of this step, you will have a solid understanding of why you are building the EHR system and a rough vision of its components. Here we come close to one thing that’s often overlooked by people sharing their thoughts on EMR software development.

Related: How to Build a Medical Startup

Step 4: Ensure Compliance with Regulatory Standards

In creating a HIPAA-compliant EHR system, regulatory alignment isn’t optional—it’s baked into every feature from user authentication to audit logs. Certifications and privacy protocols should be validated early, not patched on later.

For U.S.-based products, HIPAA compliance is non-negotiable. But depending on your scope, you might also need to meet:

  • HITECH regulations
  • ONC-ATCB certification for meaningful use
  • CE Marking (if entering the EU market)
  • SOC 2 or ISO 27001 (for enterprise partnerships)

This step isn’t about checking a box. It’s about baking compliance into your product architecture, access policies, and operational workflows from the ground up.

Security and HIPAA compliance

Of course, as any healthcare solution dealing with protected health information (PHI), EHR software must comply with HIPAA regulations.

EHR HIPAA EMR development concept

We covered the topic ad nauseam in separate blogs, e.g., here: Comprehensive Guide HIPAA-Compliant Application Development.

Among other things, to make EHR software HIPAA compliant, we need to restrict access control to patient data based on user roles, and also keep automated logs running to record every action on the system for audit purposes.

Ensuring patient privacy is a cornerstone of EHR system design, particularly when handling sensitive information like allergies, disease history, and ongoing treatment records.

When you create an EHR platform, integrating certification standards such as ONC-ATCB or CE Marking ensures that your system meets the necessary regulations for safety and performance.

These certifications not only instill confidence in healthcare providers but also help streamline the approval process when rolling out new features like e-prescriptions, lab integrations, or clinical decision support tools.

Step 5: Design System Architecture

Designing the architecture of your EHR system is where the real foundations are laid—both in terms of the visual structure users will interact with and the invisible data infrastructure that makes everything run smoothly. This phase defines how core features connect, how data flows, and how to ensure the system is scalable, secure, and maintainable in the long run.

Core features: UX meets system logic

When designing an EHR system, one thing you might miss is to check with programmers whether the design is not too complex to develop. They call it technical UX validation.

EMR example

Developers can offer legit shortcuts when they know a more optimal way for realizing certain features.

Of course, virtually any design can be coded into the app. However, we’re looking for an adequate blend of functionality, UI, and required effort.

Note how many EHRs have too much on-screen stuff: checkboxes, fields, tabs, menus, etc. Get more than seven major interactive elements on a single screen, and your customer is lost. This happens when software developers and designers don’t really put themselves in their client’s shoes for every specific user role.

During the design phase, it’s vital to focus on EMR software design principles that cater to both front-end users like doctors and back-end functionalities such as scheduling, reporting, and privacy management. By ensuring that your EHR and EMR software development processes incorporate user-friendly interfaces, you’ll reduce the learning curve for medical staff.

Data architecture: blueprint for information flow

Your EHR software development must include a robust data architecture that supports secure storage, HIPAA compliance, and interoperability with external systems like labs, payers, and health information exchanges.

Your system’s data architecture involves designing how patient data will be stored, queried, and synchronized across modules like appointments, billing, prescriptions, and clinical notes. Whether you’re using a relational database (e.g., PostgreSQL) or document-based storage (e.g., MongoDB), ensure it’s built to support regulatory requirements like HIPAA audit logging and role-based access.

Plan for real-time data sync between front-end clients and backend services—especially if your EHR system will support offline mode or distributed clinical environments. Also, consider future integrations with FHIR-based systems and national networks from day one.

Aligning architecture with agile

The design stage really kicks in the agile development cycle. Without boring you to death, the agile methodology is the golden standard in the software development industry.

Related: Agile App Development: Building Winning Products

Agile means there will be several iterations for the design and all consecutive steps of the EHR development process. Even after the release, because great products tend to grow, reflecting the market dynamics and changing user needs.

EMR EHR concept abstract

Therefore, the agile approach helps establish the necessary processes, team composition, tools, and everything required to sustain an EHR long term.

Step 6: Choose Technology Stack

Choosing the right technology stack for your EHR system is not just a technical decision—it directly affects your app’s speed, reliability, regulatory readiness, and even time-to-market. The right stack ensures that your developers can build, scale, and maintain the app without running into constant bottlenecks.

Aligning stack with team composition

When developing custom EHR software, your tech stack must align with your team’s capabilities—whether it’s React for front-end, Node.js for APIs, or PostgreSQL for patient data. Don’t choose tools your team can’t master.

Needless to say, you need to work with a team having plenty of experience building EHR solutions. If you are building an EHR from scratch, the following team composition should suffice:

  • front-end devs (iOS/Android/React, etc. — based on the apps you’re building)
  • full-stack back-end developer for working on the core logic, database, security, etc.
  • dedicated API developer
  • QA engineers
  • UX/UI designer
  • Product manager
  • Project manager

how to build EHR system question banner 3

You may be surprised to see two seemingly similar roles like product and project manager on the list. However, those are pretty different. While the product manager ensures your vision is carefully carried over to healthcare app developers, the project manager is busy with handling development, design, and testing tasks day-to-day.

Your tech stack choices should reflect the skills of your team and the specific requirements of the EHR product. For example:

  • Front-end: React (web), React Native or Flutter (mobile) to enable cross-platform speed.
  • Back-end: Node.js, Django, or .NET depending on performance, scalability, and HIPAA compliance features.
  • Database: PostgreSQL or MongoDB for structured vs. flexible schemas, depending on how your clinical data is modeled.
  • APIs: REST or GraphQL for modern, interoperable interfaces. FHIR compatibility is a must for EHRs that plan to integrate externally.

Cloud platforms like AWS, Google Cloud, or Azure offer HIPAA-ready environments with baked-in compliance tools. If you’re pursuing AI features, consider adding GPU-ready infrastructure and frameworks like TensorFlow or PyTorch to your stack early on.

Support for emerging technologies

Advanced EHR platform development increasingly includes AI, wearables, and real-time alerts. Whether parsing vitals or enabling telehealth, emerging tech is shaping how modern EHRs support patient care.

If you have a medical background, you know pretty well what features development you need in an EMR, such as patient records, charting, reports, etc. My bet is if you’re looking to build an EHR, you don’t just need electronic health records with a super user-friendly interface. You’re likely looking for more advanced features backed by the latest technologies, for example:

  • AI and machine learning, helping with parsing medical data, diagnosing, and focusing doctors’ attention on patients in a risk group
  • Internet of Things and wearables to feed EHR with patients’ vitals in real-time
  • Telemedicine integrations
  • Blockchain-based EHR for trustless operations among a consortium of companies

Related: IoT App Development Guide and Blockchain in the Healthcare

Also Read: How to Build a Wearable App for iOS and Android

Developers must also consider key integrations, such as e-prescriptions and lab tests, to streamline workflows. Additionally, building features like chat functionality for inter-staff communication or adding mental health tracking can further enhance the system’s utility for diverse healthcare settings.

EHR dashboard example

It’s high time for improving providers’ EHR experience with tools like ambient scribes, automatic handwriting recognition, and AI-based imagery analysis.

Step 7: Create Custom UI/UX for Clinical Workflows

User interface design isn’t just about making things look nice—it’s about eliminating friction in clinical workflows. When done right, great UI/UX becomes invisible. When done poorly, it becomes the thing your clinicians complain about most.

Prototyping and design

UI and UX design play a vital role in custom EHR software development, helping reduce clinician fatigue and streamline patient data access. Legacy systems often suffer from bloated UIs and poor usability.

Why do doctors and nurses constantly complain about EHR systems? Why do they call them 800-pound gorillas in the healthcare industry and scold them for their click-to-death nature? Because some of them serve the healthcare system as a whole (read billing) and don’t care that much about med personnel’s needs.

Related: The Ultimate Guide to UI/UX Design and Healthcare App Design

Custom EMR development, in that sense, sets you completely free. You may design unique front ends for different users so that ERM software doesn’t get in their way.

From user flows to prototypes

Designers review the needs of your target audience and define user journeys on flowcharts to understand the most optimal way for customers to navigate around the software.

Low-fidelity designs

They then come up with rough mockups, also known as low-fidelity wireframes. It’s like sketching application screens on a napkin. Only they do that in special programs like Figma.

EHR system example

Figma, which we also prefer, is so popular because it allows UX/UI engineers to interconnect all designed screens. As a result, the screens come to life and react to different gestures and clicks. This effectively turns otherwise static screens into an interactive prototype.

Lately, however, our team goes straight from design to code using Figma built-in tools. We now also prefer rapid coded prototypes whenever applicable.

High-fidelity designs

The next thing on the list is to turn the primitive prototype into a high-fidelity one. That simply means updating the graphics to what users will actually see in the app. Why not start with the refined version of UX/UI in the first place? Because it’s easier and cheaper to iterate on rough wireframes.

Validate with clinical users, not just stakeholders

The sole purpose of the interactive prototype is design validation. We need to test it with users before starting development. We need to make sure that the EHR software we’re building is intuitive and fulfills customer needs appropriately. You see, programming these interfaces would take way more time than several iterations of design and user testing.

We use such tools as usertesting.com to gather feedback and improve the prototype before building EHR software.

It’s essential to test prototypes not just with product stakeholders, but with real clinical users—doctors, nurses, administrative staff—who will use the tool daily. Their insights reveal bottlenecks that aren’t always obvious in planning meetings.

Step 8: Integrate APIs and Third-Party Services

No modern EHR is an island. From e-prescriptions to lab reports, telehealth, and patient intake forms—your system needs to plug into an ecosystem of services already used across healthcare settings. The ability to integrate cleanly, securely, and reliably often makes or breaks real-world adoption.

Build for extensibility from the start

A solid EHR architecture should be API-first, which means all your system’s core functionalities—from patient record retrieval to appointment booking—should be available through documented endpoints. This makes it easier to layer on features or connect to services down the line without costly rewrites.

You’ll also want to support modern data exchange standards like FHIR (Fast Healthcare Interoperability Resources) and HL7, especially if you’re integrating with national networks or providers who demand compatibility with existing clinical systems.

Common third-party integrations

To build a fully connected EHR system, integrate essential third-party services like Surescripts for eRx, Twilio for telehealth, and lab providers for diagnostics. This improves care delivery and administrative efficiency.

Here are some typical integrations that EHR platforms often require:

  • E-prescription platforms (e.g., Surescripts)
  • Lab and diagnostic systems
  • Telehealth providers (e.g., Zoom for Healthcare, Twilio)
  • Payment processors for billing modules
  • Scheduling tools (both internal and external-facing)
  • Wearable and IoT devices to feed real-time vitals
  • CRM and patient engagement tools

These services often offer SDKs or APIs that your EHR development team will need to integrate with, authenticate securely, and maintain over time.

Future-proofing the stack

Your EHR platform should support webhooks and real-time event triggers—critical for use cases like lab result alerts or medication adherence tracking. These features enhance the user experience and are increasingly used in real-time healthcare workflows (e.g., notifying a provider when lab results arrive or triggering alerts when patient vitals cross thresholds).

This isn’t just a technical win—it’s a user experience differentiator.

Step 9: Implement Data Security, Encryption, and Backup Measures

When developing HIPAA-compliant EHR software, security features must be baked in from day one—covering encryption, data backups, and access control. Patient trust and regulatory fines are both on the line.

Data security

Set up role-based access controls so users only see what they need. Log every action—especially around patient data. Include session timeouts, brute-force protection, and anomaly alerts to cover the basics.

Encryption

Encrypt all data in transit (TLS 1.2+) and at rest (AES-256). Use managed services from HIPAA-compliant cloud providers to handle encryption keys, logs, and access policies without reinventing the wheel.

Backups

Automate encrypted, offsite backups with clearly defined RPOs/RTOs. Run restore tests regularly. The worst time to find out your backup strategy sucks is when you need it.

Step 10: Prepare for Launch

Before launching your new EHR system, you need a controlled rollout strategy, compliance checks, and a fully briefed support team. Patient care and operational safety depend on a smooth go-live process.

Get your launch checklist in order

Make sure you’ve covered critical pre-launch checks:

  • Confirm role-based access is correctly configured
  • Validate all third-party integrations (eRx, labs, scheduling) are stable
  • Ensure performance under expected user loads (especially during peak hours)
  • Review HIPAA compliance touchpoints, including logging, backups, and data retention

Also, verify that your go-live version reflects all final content from stakeholder sign-off and that a rollback plan exists—just in case.

Timing the launch and team coordination

At some point, when the product is doing what it’s supposed to do, you will launch it publicly.

Pick a low-traffic day for go-live. Make sure your devs, QA, and product team are all on standby. Assign a designated point person to triage post-launch feedback and hotfix requests in real-time.

Launch success isn’t just about stability—it’s about creating trust with your clinical users from day one.

Step 11: Execute Testing and Validate System Functionality

Stress-testing your system is a must when building robust EHR software. QA should simulate real clinical chaos to ensure performance, accuracy, and security hold up under pressure.

Quality assurance from the start

Ok, so testing goes hand in hand with development. Every new version of the healthcare software needs to be tested before shipping it into production. Developers include automatic tests right into code. Then, there’s always a QA engineer going through all possible scenarios, trying to “break” the system from all imaginable angles.

Related: QA Guide: Steps, Tools, Best Practices and More

Go beyond basic QA during EHR development

System validation should include:

  • Functional testing (do features work as expected?)
  • Regression testing (did recent changes break anything?)
  • Load testing (can it handle real-time usage from multiple users?)
  • Security testing (is your data leak-proof under stress?)

You should also test edge cases—like poor Wi-Fi, outdated devices, or simultaneous data edits from different roles—to mimic real clinical environments.

Include clinical validation

Finally, validation must involve real end users: physicians, nurses, billing admins. Their hands-on feedback during final testing rounds will highlight workflow friction points that automated tests can’t catch.

Step 12: Roll Out in Phases and Train Clinical Staff

A phased rollout helps ensure successful EHR implementation, while targeted training improves staff adoption. Break the deployment into smaller launches and tailor onboarding by role for smooth integration.

Go phased, not flashy

Start with a controlled group—like a single department or clinic—before scaling across the organization. This lets you validate workflows, uncover edge cases, and make adjustments without overwhelming your staff or support team.

Once the pilot proves stable, you can extend rollout site-by-site or team-by-team, gathering real-time feedback at every stage.

Don’t skip the training

Even the most intuitive UI won’t help if staff don’t understand it. Build training programs tailored to each user role—physicians, nurses, admins, billing teams. Include:

  • Hands-on sessions
  • Role-specific cheat sheets
  • Shadowing workflows in real scenarios

Set up dedicated support channels during rollout to answer “how do I…?” questions quickly. The smoother the handoff, the faster the adoption.

Step 13: Provide Ongoing Maintenance and Support + Continuous Optimization

Post-launch, your team should continue to optimize and support the EHR software based on real user feedback. Regular updates, issue resolution, and feature improvements keep the system aligned with evolving healthcare needs.

Support and iteration

That’s not the end of the development cycle, though, as you will continue to work on new features, improvements, fixing some lingering minor issues, and keeping the EHR software up-to-date.

EMR EHR concept

Of course, that process is way less intensive compared to the initial efforts for EHR implementation. Still, it’s something you need to consider and foresee a retainer team for handling all these tasks.

Feedback loops and product evolution

Establish ongoing feedback channels with your users—monthly surveys, quarterly check-ins, or in-app feedback tools. Clinical workflows evolve, and your EHR should too.

Assign a product owner or clinical informatics lead to translate user feedback into actionable updates. Prioritize enhancements that reduce friction, improve performance, or meet new compliance standards.

Even though coding is one of the most crucial parts of the entire EMR development process, it’s often little understood by business owners. And rightly so, developers might have an even harder time parsing through the daily healthcare routine of medical workers and management.

That’s exactly why post-launch support matters. It’s not just bug fixes—it’s translating the messy reality of care delivery into ongoing product updates that make life easier for clinicians and devs alike.

Tech Stack for Building EMR/EHR Software

I believe businesses choose companies or, rather, people when deciding on a development partner, not technologies. I mean, if you run into a Microsoft.net development shop, you’ll be stuck with their tech stack, regardless of your preferences. And it will be tough to convince them to switch to this new shiny thing you’ve read about at a random blog. But that should not be your concern, really. All technologies work just fine, in the right hands.

Related: How to choose the right tech stack for your application

A word of advice here would be to check whether the team can work with your existing solutions and other third-party services you want to integrate with. One more thing worth double-checking is to ask for a microservices-based approach to the EHR’s architecture, which should be an obvious no-brainer to any capable team.

how to build EHR system question banner 4

EHR/EMR System Development Cost

$400,000+ for a mid-level EHR system. Up to $1,000,000 for a full-blown platform. Sounds scary? Well, depending on your needs, you may just need integrations, which often fall well within the $100K range. I’d say a decent prototype for the web (without mobile clients) should be doable in a $150K-$200Kish range.

Related: App Development Costs: The Complete Breakdown

Topflight Apps’ Experience in EHR Software Development

I get it; most healthcare companies are interested in integration services, either looking to integrate existing EHR systems with new solutions or connecting EHRs by established vendors to some other software they use.

Check out our EHR integration services

After all, developing electronic health records from scratch almost sounds like a heroic endeavor, requiring a substantial budget and a considerable amount of time. However, EHRs don’t always have to be these humongous systems.

For instance, look at an RPM platform with a built-in EHR we made for Dedica. The solution is lightweight and, at the same time, very effective. Eventually, the client went on to provide the platform to other practices via a subscription model, successfully securing his first $300,000-worth ARR deal.

Dedica EHR developed with smarts

We also often find ourselves working on EHR/EMR integration projects. Here’s a brief description of two recent projects in the space:

#1. NDA-protected EHR integration project

ADT, Imaging Orders(ORM), Imaging Results(ORU)

Worked with a facility IT team and teleradiology group to integrate multiple PACS, billing, partner facilities to create a streamlined workflow for radiologists to read studies remotely. 

  • Epic EHR integration
  • ADT messaging
  • Orders (ORM) messaging
  • Solicited results (ORU)

#2. NDA-protected EMR integration project

ADT demographics, discharge orders (ORM)

Worked with a vendor to construct a customized care team and executive web dashboard for patient census and appropriate level of care management.

  • Epic ADT integration
  • Diagnosis Resource Group (DRG) coding
  • Epic discharge order (ORM) integration

I don’t say that often, but Topflight is the right place to bring your EHR automation ideas to life. The company has intricate knowledge of what medical workers have to deal with and what can be done to help them achieve better results without burnout.

Whether you decide to make EMR or build EHR software from scratch, the result should empower your healthcare facility to offer better patient care and streamline operational efficiencies. Custom solutions allow you to integrate features like reporting, scheduling, and real-time clinical decision support, ensuring that your system evolves with your practice.

Even if you don’t have millions of dollars to invest in a brand-new EHR solution for your clinic but have secured a $100,000-$200,000 budget for IT automation, we can help you build something beautiful and engaging. Something that your staff and patients will love to use.

Related Articles:

  1. HIPAA Compliant App Development 
  2. Patient Portal App Development Guide
  3.  SMART on FHIR Appp Development 
  4. How to build a doctor’s appointment application 
  5. How to develop a hospital management system
  6. Guide to collecting healthcare data
  7. How to create a telehealth application 
  8. E-Prescription App Development Guide
  9. EHR for Medical Billing
  10. Surescripts Integration: Main Steps

[This blog was originally published in January 2022, and has been updated in light of more recent information]

FAQ

 

What's the difference between EHR and EMR?

One uses the term “health” and the other “medical” — perfect synonyms. Some say that EMRs usually work within a single practice while EHRs work across multiple healthcare organizations. In practice, though, both EHR and EMR are used interchangeably.

Can you help us integrate third party software with our EPIC/Cerner/AllScripts EHR?

Absolutely

How long with it take to create EHR software from scratch?

12-18 months; 6-9 months for an MVP.

If there's one biggest mistake we can make with EHR development, what would that be?

Demand agile development from your development partner. You will need incremental roll-out and validation of software, which is only possible with the agile pattern.

What technology stack do you recommend for building an EHR system?

Absolutely any tech stack will work as long as you pick the right team. You shouldn’t limit yourself to specific information technology; it’s all about niche expertise and the right mix of design and development talent on a team. Probably one exception is cloud hosting: you need it, but again, that can be anything.

Konstantin Kalinin

Head of Content
Konstantin has worked with mobile apps since 2005 (pre-iPhone era). Helping startups and Fortune 100 companies deliver innovative apps while wearing multiple hats (consultant, delivery director, mobile agency owner, and app analyst), Konstantin has developed a deep appreciation of mobile and web technologies. He’s happy to share his knowledge with Topflight partners.
Learn how to build winning apps.

Privacy Policy: We hate spam and promise to keep your email address safe

Copy link